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What the Vocabulary browser provides | ||
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1 | Number of systematic reviews which have been annotated with the terms in the vocabulary | |
2 | Vocabularies from where the term has been taken | |
3 | The parent or broader terms | |
4 | The child or narrower terms |
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Controlled vocabularies used to build the Cochrane vocabulary
The Linked Data team chose controlled vocabularies to build the Cochrane vocabulary with the following aims:
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Controlled vocabularies | |
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MedDRA | |
WHO ATC/DDD | |
RxNorm | |
SNOMED CT |
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Which vocabularies are relevant to P, I, C, or O?
Vocabularies for P
For age and sex, MeSH ranges and headings are used.
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If you find a term in SNOMED CT that you feel would be applicable for annotation of a Condition, but you cannot access the term in the P part of the PICO annotator, please request it via the Vocabulary Request form on your Review Group page. |
Vocabularies for I and C
The terms for drug interventions come from the following vocabularies:
- RxNorm
- WHO ATC
- SNOMED CT
Drug categories
WHO ATC and SNOMED CT are used for drug categories.
Many interventions (especially at the review level) are drug categories rather than a single agent - antibiotics, vitamins, analgesics, etc. RxNorm only lists individual drugs or drug combinations and has no codes for drug categories.
Individual drugs
Since both RxNorm and WHO ATC have terms for individual drugs, either one can be used to annotate a drug intervention. However, the terms in WHO ATC are linked to drug categories while the terms in RxNorm are not. Because of this, a drug with multiple uses may appear more than once in different parts of the WHO ATC vocabulary tree.
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In cases where there are several options to choose from, for instance one or more WHO ATC codes and an RXNorm code, then it is best to use the most appropriate WHO ATC codes rather than the RxNorm code. If you are not sure which one to choose, use the RxNorm code. |
Drug combinations
Non-drug interventions
Terms for all non-drug interventions are drawn from SNOMED CT. As with P, only selected subsets of this vocabulary are included in the Cochrane vocabulary.
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If you find a term in SNOMED that would be applicable for annotation of a non-drug intervention, but you cannot access the term in the I or C part of the PICO annotator, please request it via the Vocabulary Request form on your Review Group page. |
Vocabularies for O
Many of the terms used in the Conditions section of P are also applicable to outcomes. Therefore, the same controlled vocabulary terms that are available in P (MedDRA and portions of SNOMED CT) are used for Outcomes.
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Synonyms and near synonyms in the controlled vocabularies
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When synonyms or near-synonyms appear in the controlled vocabularies, then the following processes will be followed to standardize annotations. |
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There is now a type-ahead function in the PICO annotator that shows the frequency of term use (i.e. the number of times a term has been used by annotators is displayed immediately after each term in the drop-down menu for each PICO component). |
A term in one vocabulary has a synonymous term in the same vocabulary
MedDRA
MedDRA has been structured so that every term at the second-lowest level of its hierarchy (PT - Preferred Term) has a synonymous term at its lowest level (LLT - Lowest Level Term). The LLT member of each of these pairs has been removed from the Cochrane vocabulary, so there should be no exactly identical terms from MedDRA. If you uncover any examples in the course of annotation or QA, please send a Merge request via the Vocabulary Request form on your Review Group page. However, there may be other close matches within MedDRA; for example, UK and US spellings of a term (oedema, edema etc.) are separate terms in MedDRA. This will be resolved in a way that will merge these MedDRA synonyms.
How to guide
- If one of the MedDRA synonyms is linked to a SNOMED term, pick that one.
- Annotate using the more frequently used term. If needed, send a Preferred Term Selection request via the Vocabulary Request form on your Review Group page.
- If a UK spelling exists, please use it. If you do find US spellings, request a Merge of these terms via the Vocabulary Request form on your Review Group page.
A term in one vocabulary has a synonymous term in a different vocabulary
MedDRA and SNOMED CT
The Linked Data team has attempted to identify all cases in which a term in MedDRA has a label that is identical to the label from a term in SNOMED CT and these have been merged into a single Cochrane term - with both parent terms listed in the the various tools whenever the term is used.
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